SNP Profiles of LCT EEN 261/S4   View Data

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 Key

 1234567891011121314
_Input profile
CTCCCCGTCTAGACCCAACCGGGGATCC
1._RUQ_1452
__CC_____AA_GG___
2._RUQ_1452
__CC_CTAGACGGAA__GGATCC
3._RUQ_1452
AGCCCCACAGAGACGGAAGGGGGGATCG
 1516171819202122232425262728
_Input profile
GGACCTGTCGACCCTTCTGGAGTTACCG
1._RUQ_1452
_AC__CGACCC_CTGGAG_ACCG
2._RUQ_1452
____CGACCC______CG
3._RUQ_1452
_AC_ACCGACGGAA_CCAGAAACCG
 2930313233343536373839404142
_Input profile
CCTTAAAGCCCCGTAAATGTCTCTCTCG
1._RUQ_1452
__AGAGCC____GT___CG
2._RUQ_1452
CGCT___CC_AAAT__CT_CG
3._RUQ_1452
_AGAGAG_GGACAA_AAAGAGAGCG
 43             
_Input profile
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_1452
_X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_1452
_X_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._RUQ_1452
AGX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: LCT_EEN_261_/S-4 RUQ_1452

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._LCT_EEN_261_/S-4 RUQ_1452

97.1 %
17 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._LCT_EEN_261_/S-4 RUQ_1452

90 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

3._LCT_EEN_261_/S-4 RUQ_1452

51.4 %
37 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP899 32TcSNP998 33TcSNP999 34TcSNP1060 35TcSNP1063
36TcSNP1111 37TcSNP1126 38TcSNP1253 39TcSNP1309 40TcSNP1439
41TcSNP1442 42TcSNP1458 43TcSNP1484